......Processing structure #1: <Z-G4R_refine_38_clean.inps>......
File </import/webshare/w3dna/X3DNA_2.0/config/misc_3dna.par> does NOT contain any valid xml tags for parameters
	maybe it is in the previous v1.5 version?
	so system default setting is used here...

 ...... /import/webshare/w3dna/X3DNA_2.0/config/ ...... 
 ...... reading file: misc_3dna.par ...... 

 ...... /import/webshare/w3dna/X3DNA_2.0/config/ ...... 
 ...... reading file: atomlist.dat ...... 

 ...... /import/webshare/w3dna/X3DNA_2.0/config/ ...... 
 ...... reading file: baselist.dat ...... 

 ...... /import/webshare/w3dna/X3DNA_2.0/config/ ...... 
 ...... reading file: baselist.dat ...... 
missing " P  " atom : residue name  DG, chain A, number    1 
missing " O1P" atom : residue name  DG, chain A, number    1 
missing " O2P" atom : residue name  DG, chain A, number    1 
missing " P  " atom : residue name  DG, chain A, number    1 

 ...... /import/webshare/w3dna/X3DNA_2.0/config/ ...... 

 ...... /import/webshare/w3dna/X3DNA_2.0/config/ ...... 
 ...... reading file: atomlist.dat ...... 
File </import/webshare/w3dna/X3DNA_2.0/config/misc_3dna.par> does NOT contain any valid xml tags for parameters
	maybe it is in the previous v1.5 version?
	so system default setting is used here...

 ...... /import/webshare/w3dna/X3DNA_2.0/config/ ...... 
 ...... reading file: misc_3dna.par ...... 

Time used: 00:00:00:00